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    METBO_RS10195 prephenate dehydrogenase [ Methanobacterium lacus ]

    Gene ID: 10278525, updated on 22-Oct-2024

    Summary

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    Gene symbol
    METBO_RS10195
    Gene description
    prephenate dehydrogenase
    Locus tag
    METBO_RS10195
    Gene type
    protein coding
    Organism
    Methanobacterium lacus (strain: AL-21)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium
    Old locus tag
    Metbo_2063
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    Genomic context

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    Sequence:
    NC_015216.1 (2105209..2106516)

    NC_015216.1Genomic Context describing neighboring genes Neighboring gene response regulator Neighboring gene chitobiase/beta-hexosaminidase C-terminal domain-containing protein Neighboring gene CDC48 family AAA ATPase Neighboring gene adenosylhomocysteinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Methanobacterium paludis sp. nov. and a novel strain of Methanobacterium lacus isolated from northern peatlands. Cadillo-Quiroz H, et al. Int J Syst Evol Microbiol, 2014 May. PMID 24449792

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    prephenate dehydrogenase
    WP_013645633.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015216.1 Reference assembly

      Range
      2105209..2106516
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013645633.1 prephenate dehydrogenase [Methanobacterium lacus]

      See identical proteins and their annotated locations for WP_013645633.1

      UniProtKB/TrEMBL
      F0TBU0
      Conserved Domains (3) summary
      COG4937
      Location:280 → 435
      FDXACB; Ferredoxin-fold anticodon binding domain [Translation, ribosomal structure and biogenesis]
      PRK08655
      Location:3 → 435
      PRK08655; prephenate dehydrogenase; Provisional
      cl21454
      Location:3 → 177
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases