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    METBO_RS02880 alanine--glyoxylate aminotransferase family protein [ Methanobacterium lacus ]

    Gene ID: 10277009, updated on 22-Oct-2024

    Summary

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    Gene symbol
    METBO_RS02880
    Gene description
    alanine--glyoxylate aminotransferase family protein
    Locus tag
    METBO_RS02880
    Gene type
    protein coding
    Organism
    Methanobacterium lacus (strain: AL-21)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium
    Old locus tag
    Metbo_0564
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    Genomic context

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    Sequence:
    NC_015216.1 (548334..549503)

    NC_015216.1Genomic Context describing neighboring genes Neighboring gene ORC1-type DNA replication protein Neighboring gene 6-hydroxymethylpterin diphosphokinase MptE-like protein Neighboring gene B12-binding domain-containing radical SAM protein Neighboring gene thiamine pyrophosphate-binding protein Neighboring gene acetate--CoA ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Methanobacterium paludis sp. nov. and a novel strain of Methanobacterium lacus isolated from northern peatlands. Cadillo-Quiroz H, et al. Int J Syst Evol Microbiol, 2014 May. PMID 24449792

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    alanine--glyoxylate aminotransferase family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015216.1 Reference assembly

      Range
      548334..549503
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013644166.1 alanine--glyoxylate aminotransferase family protein [Methanobacterium lacus]

      See identical proteins and their annotated locations for WP_013644166.1

      UniProtKB/TrEMBL
      F0T9Z2
      Conserved Domains (2) summary
      COG0075
      Location:5 → 379
      PucG; Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG [Amino acid transport and metabolism, Nucleotide transport and metabolism]
      cl18945
      Location:5 → 360
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases