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    METBO_RS00320 2-isopropylmalate synthase [ Methanobacterium lacus ]

    Gene ID: 10276489, updated on 22-Oct-2024

    Summary

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    Gene symbol
    METBO_RS00320
    Gene description
    2-isopropylmalate synthase
    Locus tag
    METBO_RS00320
    Gene type
    protein coding
    Organism
    Methanobacterium lacus (strain: AL-21)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium
    Old locus tag
    Metbo_0066
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    Genomic context

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    Sequence:
    NC_015216.1 (61832..63349, complement)

    NC_015216.1Genomic Context describing neighboring genes Neighboring gene response regulator Neighboring gene response regulator Neighboring gene DUF63 family protein Neighboring gene PHP domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015216.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Methanobacterium paludis sp. nov. and a novel strain of Methanobacterium lacus isolated from northern peatlands. Cadillo-Quiroz H, et al. Int J Syst Evol Microbiol, 2014 May. PMID 24449792

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    2-isopropylmalate synthase
    WP_013643670.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015216.1 Reference assembly

      Range
      61832..63349 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013643670.1 2-isopropylmalate synthase [Methanobacterium lacus]

      See identical proteins and their annotated locations for WP_013643670.1

      UniProtKB/TrEMBL
      F0T6T6
      Conserved Domains (3) summary
      cd07940
      Location:18 → 275
      DRE_TIM_IPMS; 2-isopropylmalate synthase (IPMS), N-terminal catalytic TIM barrel domain
      smart00917
      Location:369 → 501
      LeuA_dimer; LeuA allosteric (dimerisation) domain
      PRK00915
      Location:12 → 505
      PRK00915; 2-isopropylmalate synthase; Validated
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases