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    Rpl7l1 ribosomal protein L7 like 1 [ Heterocephalus glaber (naked mole-rat) ]

    Gene ID: 101700757, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Rpl7l1
    Gene description
    ribosomal protein L7 like 1
    See related
    Ensembl:ENSHGLG00000012996
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Heterocephalus glaber
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
    Orthologs
    human mouse all
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    Genomic context

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    See Rpl7l1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624754.1 (16568739..16573790, complement)

    NW_004624754.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 6 Neighboring gene canopy FGF signaling regulator 3 Neighboring gene pre T cell antigen receptor alpha Neighboring gene pleckstrin homology domain-containing family A member 3 pseudogene Neighboring gene BICRA like chromatin remodeling complex associated protein Neighboring gene cancer/testis antigen 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004624754 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L7-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HetGla_female_1.0 Primary Assembly

    Genomic

    1. NW_004624754.1 Reference HetGla_female_1.0 Primary Assembly

      Range
      16568739..16573790 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004846562.3 → XP_004846619.1  60S ribosomal protein L7-like 1 isoform X2

      UniProtKB/TrEMBL
      G5BNK3
      Conserved Domains (3) summary
      cd01657
      Location:87 → 243
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:15 → 246
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form
      pfam08079
      Location:16 → 85
      Ribosomal_L30_N; Ribosomal L30 N-terminal domain

    2. XM_004846561.3 → XP_004846618.1  60S ribosomal protein L7-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A0P6JTH9, G5BNK3
      Related
      ENSHGLP00000018184.1, ENSHGLT00000018365.1
      Conserved Domains (3) summary
      cd01657
      Location:96 → 252
      Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...
      TIGR01310
      Location:24 → 255
      uL30_euk; 60S ribosomal protein uL30, eukaryotic form
      pfam08079
      Location:25 → 94
      Ribosomal_L30_N; Ribosomal L30 N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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