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    FYTTD1 forty-two-three domain containing 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100407869, updated on 10-Oct-2024

    Summary

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    Gene symbol
    FYTTD1
    Gene description
    forty-two-three domain containing 1
    See related
    Ensembl:ENSCJAG00000016488
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs
    human mouse all
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    Genomic context

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    See FYTTD1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 17 NC_071458.1 (74370616..74404182)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 17 NC_048399.1 (74548933..74582688)

    Chromosome 17 - NC_071458.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128930048 Neighboring gene rubicon autophagy regulator Neighboring gene tyrosine-protein phosphatase non-receptor type 2-like Neighboring gene leucine rich repeats and calponin homology domain containing 3 Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif containing G Neighboring gene ribosomal protein L35a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UAP56-interacting factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071458.1 Reference mCalJa1.2.pat.X

      Range
      74370616..74404182
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002759776.5 → XP_002759822.3  UAP56-interacting factor isoform X1

      UniProtKB/TrEMBL
      F7D7P1

    2. XM_008984122.4 → XP_008982370.2  UAP56-interacting factor isoform X3

    3. XM_054247238.1 → XP_054103213.1  UAP56-interacting factor isoform X2

    4. XM_035278437.2 → XP_035134328.2  UAP56-interacting factor isoform X4

    5. XM_035278438.2 → XP_035134329.2  UAP56-interacting factor isoform X4

    6. XM_054247240.1 → XP_054103215.1  UAP56-interacting factor isoform X4

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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