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    PECAM1 platelet and endothelial cell adhesion molecule 1 [ Ovis aries (sheep) ]

    Gene ID: 100303608, updated on 10-Oct-2024

    Summary

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    Gene symbol
    PECAM1
    Gene description
    platelet and endothelial cell adhesion molecule 1
    See related
    EnsemblRapid:ENSOARG00020014798
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See PECAM1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (48252140..48351567, complement)

    Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA76 Neighboring gene testis expressed 2 Neighboring gene uncharacterized LOC132657434 Neighboring gene mast cell immunoglobulin like receptor 1 Neighboring gene DNA polymerase gamma 2, accessory subunit Neighboring gene DEAD-box helicase 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Different influence of ovine estrus synchronization treatments on caruncular early angiogenesis. Ruiz-González I, et al. Histol Histopathol, 2013 Mar. PMID 23348391
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet endothelial cell adhesion molecule

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      48252140..48351567 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_060395774.1 → XP_060251757.1  platelet endothelial cell adhesion molecule isoform X7

    2. XM_004013029.6 → XP_004013078.3  platelet endothelial cell adhesion molecule isoform X7

      UniProtKB/TrEMBL
      W5PZG8
      Related
      ENSOARP00020042344.1, ENSOART00020046403.1
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    3. XM_012186335.4 → XP_012041725.3  platelet endothelial cell adhesion molecule isoform X6

      UniProtKB/TrEMBL
      W5PZG8
      Related
      ENSOARP00020055419.1, ENSOART00020055167.1
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    4. XM_012186334.4 → XP_012041724.3  platelet endothelial cell adhesion molecule isoform X5

      UniProtKB/TrEMBL
      W5PZG8
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    5. XM_012186332.4 → XP_012041722.3  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      W5PZG8
      Related
      ENSOARP00020018813.2, ENSOART00020022692.2
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    6. XM_012186333.4 → XP_012041723.3  platelet endothelial cell adhesion molecule isoform X4

      UniProtKB/TrEMBL
      W5PZG8
      Related
      ENSOARP00020058335.1, ENSOART00020081910.1
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    7. XM_012186331.4 → XP_012041721.3  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      W5PZG8
      Related
      ENSOARP00020043841.1, ENSOART00020080234.1
      Conserved Domains (1) summary
      smart00409
      Location:512 → 576
      IG; Immunoglobulin

    8. XM_060395773.1 → XP_060251756.1  platelet endothelial cell adhesion molecule isoform X1

      Related
      ENSOARP00020036583.1, ENSOART00020054556.1
    Nucleotide Protein Strain
    Heading Accession and Version

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