UPK3BL1 uroplakin 3B like 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: UPK3BL1provided by HGNC
Official Full Name: uroplakin 3B like 1provided by HGNC
Primary source: HGNC:HGNC:37278
See related: Ensembl:ENSG00000267368 AllianceGenome:HGNC:37278
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: UPLP; UPK3BL
Summary: Predicted to be active in membrane. [provided by Alliance of Genome Resources, Oct 2024]
Expression: Ubiquitous expression in esophagus (RPKM 86.5), thyroid (RPKM 43.5) and 25 other tissues See more
Orthologs: all
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Genomic context

Location:: 7q22.1

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	7	NC_000007.14 (102637025..102642791, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	7	NC_000007.13 (102277472..102283238, complement)

Chromosome 7 - NC_000007.14 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
BioProject: PRJEB4337
Publication: PMID 24309898
Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

SHGC-31100 (e-PCR)
- UniSTS:42249

D10S275 (e-PCR)
- UniSTS:147992

RH93196 (e-PCR)
- UniSTS:92462

G43579 (e-PCR)
- UniSTS:95025

L18426 (e-PCR)
- UniSTS:34648

D1S1423 (e-PCR)
- UniSTS:149619

Readthrough POLR2J2-UPK3BL1

Readthrough gene: POLR2J2-UPK3BL1, Included gene: POLR2J2

Gene Ontology Provided by GOA

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uroplakin-3b-like protein 1

Names: uroplakin 3C protein; uroplakin-3-like protein; uroplakin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.