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    BTRCP1 beta-transducin repeat containing E3 ubiquitin protein ligase pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100420631, updated on 17-Sep-2024

    Summary

    Official Symbol
    BTRCP1provided by HGNC
    Official Full Name
    beta-transducin repeat containing E3 ubiquitin protein ligase pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:51546
    See related
    AllianceGenome:HGNC:51546
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See BTRCP1 in Genome Data Viewer
    Location:
    6q23.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (135330633..135331568, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (136518894..136519829, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (135651771..135652706, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:135570900-135572099 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:135573042-135573542 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:135573543-135574043 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:135577907-135579106 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:135585007-135585209 Neighboring gene microRNA 548a-2 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:135591948-135592842 Neighboring gene VISTA enhancer hs1351 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25105 Neighboring gene CRISPRi-validated MYB cis-regulatory element XLOC_042889 Neighboring gene uncharacterized LOC124901407 Neighboring gene Sharpr-MPRA regulatory region 12318 Neighboring gene Abelson helper integration site 1 Neighboring gene MPRA-validated peak6137 silencer Neighboring gene MPRA-validated peak6138 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25106 Neighboring gene MPRA-validated peak6140 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25107 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17569 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17570 Neighboring gene AHI1 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17571 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr6:135921214-135922413 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 73 Neighboring gene long intergenic non-protein coding RNA 2524

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_025874.1 

      Range
      101..1036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      135330633..135331568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      136518894..136519829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)