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    GNPATP glyceronephosphate O-acyltransferase pseudogene [ Homo sapiens (human) ]

    Gene ID: 100130060, updated on 17-Sep-2024

    Summary

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    Official Symbol
    GNPATPprovided by HGNC
    Official Full Name
    glyceronephosphate O-acyltransferase pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:34031
    See related
    AllianceGenome:HGNC:34031
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See GNPATP in Genome Data Viewer
    Location:
    16q21
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (60654071..60655974, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (66445608..66447511, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (60687975..60689878, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2141 Neighboring gene NOP58 ribonucleoprotein homolog (yeast) pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60112162-60113065 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:60114633-60115134 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60117794-60118510 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:60251661-60252265 Neighboring gene uncharacterized LOC101927605 Neighboring gene nuclear pore associated protein 1 like (pseudogene) Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:60493067-60493566 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:60572390-60572596 Neighboring gene uncharacterized LOC107984812 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:60934428-60935009 Neighboring gene VISTA enhancer hs1383 Neighboring gene RPS27A pseudogene 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007472.2 

      Range
      101..2004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      60654071..60655974 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      66445608..66447511 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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