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    IPPKP1 inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100874419, updated on 17-Sep-2024

    Summary

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    Official Symbol
    IPPKP1provided by HGNC
    Official Full Name
    inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:39390
    See related
    AllianceGenome:HGNC:39390
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See IPPKP1 in Genome Data Viewer
    Location:
    13q12.11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (21102706..21104507, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (20295788..20297589, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (21676845..21678646, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370104 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:21649238-21649738 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:21649739-21650239 Neighboring gene ribosomal protein S12 pseudogene 23 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:21676185-21676352 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7429 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:21687639-21688526 Neighboring gene NANOG hESC enhancer GRCh37_chr13:21704143-21704651 Neighboring gene small nucleolar RNA SNORD27 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7430 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7431 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7432 Neighboring gene Sin3A associated protein 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_032283.4 

      Range
      101..1902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      21102706..21104507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      20295788..20297589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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