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    SLC35C2P1 SLC35C2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100129483, updated on 12-Sep-2024

    Summary

    Official Symbol
    SLC35C2P1provided by HGNC
    Official Full Name
    SLC35C2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:54894
    See related
    AllianceGenome:HGNC:54894
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    Location:
    Xp22.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (16897360..16898521, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (16479879..16481040, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (16915483..16916644, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene taxilin gamma Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29456 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20681 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20682 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:16888501-16889179 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29457 Neighboring gene RB binding protein 7, chromatin remodeling factor Neighboring gene RNA, U4 small nuclear 6, pseudogene Neighboring gene CRISPRi-validated cis-regulatory element chrX.345 Neighboring gene RALBP1 associated Eps domain containing 2 Neighboring gene MPRA-validated peak7360 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chrX:17044716-17044974 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene chromobox 1 pseudogene 2

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022585.3 

      Range
      101..1262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      16897360..16898521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      16479879..16481040 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)