U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    MARCKSP1 myristoylated alanine rich protein kinase C substrate pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 4083, updated on 10-Oct-2023

    Summary

    Go to the top of the page Help
    Official Symbol
    MARCKSP1provided by HGNC
    Official Full Name
    myristoylated alanine rich protein kinase C substrate pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:6760
    See related
    AllianceGenome:HGNC:6760
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MACSL1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    21q21.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (26227560..26235914, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (24585676..24594025, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 21 NC_000021.8 (27599879..27608233, complement)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein Neighboring gene uncharacterized LOC124900466 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr21:27511930-27513129 Neighboring gene NANOG hESC enhancer GRCh37_chr21:27521254-27521823 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18321 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13235 Neighboring gene H3K27ac hESC enhancer GRCh37_chr21:27542299-27542823 Neighboring gene RNA, U6 small nuclear 926, pseudogene Neighboring gene APP divergent transcript Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr21:27653974-27654905 Neighboring gene OCT4 hESC enhancer GRCh37_chr21:27683542-27684254 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr21:27761856-27763055 Neighboring gene CYYR1 antisense RNA 1 Neighboring gene uncharacterized LOC105372758 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr21:27813209-27814408 Neighboring gene uncharacterized LOC107985474 Neighboring gene cysteine and tyrosine rich 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Northern blot and in situ hybridization analyses of MARCKS mRNA expression in the cerebral cortex of the macaque monkey. Higo N, et al. Cereb Cortex, 2002 May. PMID 11950773
    2. Molecular cloning and chromosomal mapping of a cDNA encoding human 80K-L protein: major substrate for protein kinase C. Sakai K, et al. Genomics, 1992 Sep. PMID 1427823
    3. Identification of MARCKS, FLJ11383 and TAF1B as putative novel target genes in colorectal carcinomas with microsatellite instability. Kim NG, et al. Oncogene, 2002 Aug 1. PMID 12140758
    4. The DNA sequence of human chromosome 21. Hattori M, et al. Nature, 2000 May 18. PMID 10830953

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Identification of MARCKS, FLJ11383 and TAF1B as putative novel target genes in colorectal carcinomas with microsatellite instability.
      Title: Identification of MARCKS, FLJ11383 and TAF1B as putative novel target genes in colorectal carcinomas with microsatellite instability.
    2. MARCKS mRNA level expression in cerebral cortex is linked to functional specialization for neuronal plasticity.
      Title: Northern blot and in situ hybridization analyses of MARCKS mRNA expression in the cerebral cortex of the macaque monkey.
    Submit: New GeneRIF Correction

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

    Go to the top of the page Help

    Markers

    Other Names

    • myristoylated alanine-rich protein kinase C substrate (MARCKS, 80K-L)-like 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007487.2 

      Range
      101..8455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      26227560..26235914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      24585676..24594025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases