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    HTR5BP 5-hydroxytryptamine receptor 5B, pseudogene [ Homo sapiens (human) ]

    Gene ID: 645694, updated on 17-Sep-2024

    Summary

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    Official Symbol
    HTR5BPprovided by HGNC
    Official Full Name
    5-hydroxytryptamine receptor 5B, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:16291
    See related
    Ensembl:ENSG00000125631 AllianceGenome:HGNC:16291
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HTR5B; 5-HT5B; GPR134
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    Genomic context

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    See HTR5BP in Genome Data Viewer
    Location:
    2q14.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (117859427..117903680)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (118292751..118337038)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (118617003..118661256)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 195 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:118572589-118573124 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11892 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11893 Neighboring gene uncharacterized LOC107985939 Neighboring gene DEAD-box helicase 18 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:118615796-118616748 Neighboring gene uncharacterized LOC101929908 Neighboring gene coiled-coil domain containing 93 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11894 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11895 Neighboring gene RNA, 7SL, cytoplasmic 111, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Human 5-HT(5) receptors: the 5-HT(5A) receptor is functional but the 5-HT(5B) receptor was lost during mammalian evolution. Grailhe R, et al. Eur J Pharmacol, 2001 Apr 27. PMID 11343685
    2. GGA2 and RAB13 promote activity-dependent β1-integrin recycling. Sahgal P, et al. J Cell Sci, 2019 Jun 7. PMID 31076515

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • 5-hydroxytryptamine (serotonin) receptor 5 pseudogene
    • 5-hydroxytryptamine (serotonin) receptor 5A pseudogene
    • 5-hydroxytryptamine (serotonin) receptor 5B, pseudogene
    • G protein-coupled receptor 134

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008325.1 

      Range
      101..44354
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      117859427..117903680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      118292751..118337038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_003947.1: Suppressed sequence

      Description
      NR_003947.1: This RefSeq was permanently suppressed because there is insufficient evidence that this locus is transcribed.
    Nucleotide Protein
    Heading Accession and Version

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