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    CNOT6LP1 CNOT6L pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 729530, updated on 17-Sep-2024

    Summary

    Official Symbol
    CNOT6LP1provided by HGNC
    Official Full Name
    CNOT6L pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:32355
    See related
    AllianceGenome:HGNC:32355
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See CNOT6LP1 in Genome Data Viewer
    Location:
    15q21.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (56003305..56007179, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (53806751..53810624, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (56295503..56299377, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr15:55953352-55954256 Neighboring gene protogenin Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:55957303-55957803 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9449 Neighboring gene NANOG hESC enhancer GRCh37_chr15:56028112-56028613 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr15:56034229-56035192 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:56036083-56036584 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:56036585-56037084 Neighboring gene NEDD4 intron nontranscribed DNase I hypersensitive site-defined enhancer Neighboring gene NEDD4 E3 ubiquitin protein ligase Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_40173 Neighboring gene small nucleolar RNA U13 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:56250068-56250245 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:56285058-56285840 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6460 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:56286819-56287016 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:56300574-56300741 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr15:56332364-56333563 Neighboring gene RNA, 7SL, cytoplasmic 568, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr15:56341781-56341956 Neighboring gene CD24 molecule pseudogene 2

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • CCR4-NOT transcription complex subunit 6-like pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009481.1 

      Range
      101..3975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      56003305..56007179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      53806751..53810624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)