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    LOC643709 macrophage expressed 1 pseudogene [ Homo sapiens (human) ]

    Gene ID: 643709, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC643709
    Gene description
    macrophage expressed 1 pseudogene
    See related
    Ensembl:ENSG00000254704
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC643709 in Genome Data Viewer
    Location:
    11q12.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (59287142..59289549, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (59237890..59240297, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (59054615..59057022, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene tryptophanyl-tRNA synthetase 1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:59030676-59031176 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:59031177-59031677 Neighboring gene solute carrier family 25 member 47 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4754 Neighboring gene RNA, 7SL, cytoplasmic 435, pseudogene Neighboring gene olfactory receptor family 5 subfamily AN member 2 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021788.2 

      Range
      101..2508
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      59287142..59289549 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      59237890..59240297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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