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    Klra14-ps killer cell lectin-like receptor subfamily A, member 14, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 654449, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Klra14-psprovided by MGI
    Official Full Name
    killer cell lectin-like receptor subfamily A, member 14, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:1321089
    See related
    Ensembl:ENSMUSG00000072721 AllianceGenome:MGI:1321089
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ly49N; Klra14; Klra29; Klra31; Gm15858; EG654449
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Klra14-ps in Genome Data Viewer
    Location:
    6 63.44 cM; 6 F3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (130126069..130137711, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (130149106..130160748, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene killer cell lectin-like receptor, subfamily A, member 8 Neighboring gene predicted gene, 24712 Neighboring gene predicted gene, 23552 Neighboring gene killer cell lectin-like receptor subfamily A, member 9 Neighboring gene predicted gene, 52487

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Localization of five new Ly49 genes, including three closely related to Ly49c. McQueen KL, et al. Immunogenetics, 1998 Aug. PMID 9683662
    2. Ly49 receptors: evolution, genetic diversity, and impact on immunity. Rahim MM, et al. Immunol Rev, 2015 Sep. PMID 26284475
    3. Class I MHC-binding characteristics of the 129/J Ly49 repertoire. Makrigiannis AP, et al. J Immunol, 2001 Apr 15. PMID 11290784
    4. The ly49 gene family. A brief guide to the nomenclature, genetics, and role in intracellular infection. Schenkel AR, et al. Front Immunol, 2013. PMID 23596445, Free PMC Article
    5. Susceptibility to mouse cytomegalovirus is associated with deletion of an activating natural killer cell receptor of the C-type lectin superfamily. Lee SH, et al. Nat Genet, 2001 May. PMID 11326273

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • killer cell lectin-like receptor subfamily A member 29
    • killer cell lectin-like receptor subfamily A member 31
    • predicted pseudogene 15858

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_104105.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AC090127
      Related
      ENSMUST00000119532.3

    2. NR_104106.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in the 5' region and results in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AC090127

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      130126069..130137711 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001039117.1: Suppressed sequence

      Description
      NM_001039117.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.

    2. NM_001252149.1: Suppressed sequence

      Description
      NM_001252149.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.

    3. NM_008461.2: Suppressed sequence

      Description
      NM_008461.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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