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    LOC100128833 VPS37A, ESCRT-I subunit pseudogene [ Homo sapiens (human) ]

    Gene ID: 100128833, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100128833
    Gene description
    VPS37A, ESCRT-I subunit pseudogene
    See related
    Ensembl:ENSG00000253886
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC100128833 in Genome Data Viewer
    Location:
    5q33.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (154493301..154494751)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (155027252..155028702)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (153872861..153874311)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:153825354-153825854 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16542 Neighboring gene SAP30 like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153851993-153852964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153852965-153853936 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:153855265-153855452 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153855607-153856461 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153859235-153859744 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153863719-153864218 Neighboring gene heart and neural crest derivatives expressed 1 Neighboring gene myotubularin related protein 7 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23478 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23480 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153898879-153899379 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:153900569-153901172 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153920920-153921422 Neighboring gene CIR1 pseudogene 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_83489 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:153962321-153962904 Neighboring gene CIR1P1-LARP1 intergenic CAGE-defined high expression enhancer Neighboring gene microRNA 3141

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • vacuolar protein sorting 37 homolog A (S. cerevisiae) pseudogene
    • vacuolar protein sorting 37 homolog A pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_009620.3 

      Range
      101..1551
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      154493301..154494751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      155027252..155028702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)