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    LAMTOR5P1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 106478910, updated on 17-Sep-2024

    Summary

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    Official Symbol
    LAMTOR5P1provided by HGNC
    Official Full Name
    late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31854
    See related
    AllianceGenome:HGNC:31854
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HBXIPL; HBXIPP1
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    Genomic context

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    See LAMTOR5P1 in Genome Data Viewer
    Location:
    1p31.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (62038811..62039386)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (61917307..61917882)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (62504483..62505058)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene PATJ crumbs cell polarity complex component Neighboring gene RNA, U6 small nuclear 1177, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:62408660-62409160 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:62415202-62416005 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:62416006-62416808 Neighboring gene uncharacterized LOC107984965 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:62505050-62505652 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:62511005-62511534 Neighboring gene RNA, 7SL, cytoplasmic 180, pseudogene Neighboring gene microRNA 3116-1 Neighboring gene microRNA 3116-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • hepatitis B virus x interacting protein pseudogene 1
    • hepatitis B virus x interacting protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_044987.1 

      Range
      101..676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      62038811..62039386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      61917307..61917882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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