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    LOC285453 TXNDC9 pseudogene [ Homo sapiens (human) ]

    Gene ID: 285453, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC285453
    Gene description
    TXNDC9 pseudogene
    See related
    Ensembl:ENSG00000227040
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC285453 in Genome Data Viewer
    Location:
    4q12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (56760912..56761610, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (60248842..60249540, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (57627078..57627776, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene cardiac hypertrophy associated epigenetic regulator 1 Neighboring gene ribosomal protein L17 pseudogene 20 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21581 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21582 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21583 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21584 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:57625689-57626530 Neighboring gene uncharacterized LOC105377668 Neighboring gene RNA, 7SL, cytoplasmic 492, pseudogene

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007356.2 

      Range
      101..799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      56760912..56761610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      60248842..60249540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_002805.2: Suppressed sequence

      Description
      NR_002805.2: This RefSeq was permanently suppressed because it is now thought that this pseudogene is not transcribed.