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LOAG_08508 polypeptide N-acetylgalactosaminyltransferase 5 [ Loa loa (eye worm) ]

Gene ID: 9945935, updated on 9-Nov-2023

Summary

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Gene symbol
LOAG_08508
Gene description
polypeptide N-acetylgalactosaminyltransferase 5
Locus tag
LOAG_08508
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Loa loa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Loa
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Genomic context

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Location:
chromosome: Unknown
Exon count:
14

NW_018108262.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene lethal protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018108262.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_018108262.1 Reference assembly

    Range
    2103..8183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003144039.2 → XP_003144087.1  polypeptide N-acetylgalactosaminyltransferase 5 [Loa loa]

    See identical proteins and their annotated locations for XP_003144087.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1I7V8C5, A0A1S0TUD1
    Conserved Domains (4) summary
    cd02510
    Location:234 → 532
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:229 → 520
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:545 → 664
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:543 → 662
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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