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LOAG_00363 hypothetical protein [ Loa loa (eye worm) ]

Gene ID: 9937731, updated on 9-Nov-2023

Summary

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Gene symbol
LOAG_00363
Gene description
hypothetical protein
Locus tag
LOAG_00363
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Loa loa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Loa
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Genomic context

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Location:
chromosome: Unknown
Exon count:
19

NW_018108187.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018108187.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_018108187.1 Reference assembly

    Range
    660715..671022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020445412.1 → XP_020304128.1  hypothetical protein LOAG_00363 [Loa loa]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1I7VPL1, A0A1S0UDJ2
    Conserved Domains (3) summary
    COG0457
    Location:424 → 637
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:544 → 571
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:681 → 836
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase

  2. XM_020445413.1 → XP_020307333.1  hypothetical protein, variant [Loa loa]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1I7VPL1, A0A1S0ULT7
    Conserved Domains (3) summary
    COG0457
    Location:405 → 618
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:525 → 552
    TPR; TPR repeat [structural motif]
    pfam05118
    Location:662 → 817
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
Nucleotide Protein
Heading Accession and Version

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