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OT_ostta01g03050 Alpha-1,6-glucosidases,pullulanase-type,C-terminal [ Ostreococcus tauri ]

Gene ID: 9834842, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta01g03050
Gene description
Alpha-1,6-glucosidases,pullulanase-type,C-terminal
Locus tag
OT_ostta01g03050
Gene type
protein coding
RNA name
Alpha-1,6-glucosidases,pullulanase-type,C-terminal
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot01g03030
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Genomic context

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See OT_ostta01g03050 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_014426.2 (483932..487105)

Chromosome 1 - NC_014426.2Genomic Context describing neighboring genes Neighboring gene FAD linked oxidase, N-terminal Neighboring gene Fructose-bisphosphate aldolase, class-I Neighboring gene Dienelactone hydrolase Neighboring gene Activator of Hsp90 ATPase homologue 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014426.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pullulanase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Alpha-1,6-glucosidases,pullulanase-type,C-terminal

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014426.2 Reference assembly

    Range
    483932..487105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003074317.1 → XP_003074364.1  Alpha-1,6-glucosidases,pullulanase-type,C-terminal [Ostreococcus tauri]

    See identical proteins and their annotated locations for XP_003074364.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y5HZG9, A0A454Y3K8, Q6PYZ0
    Conserved Domains (1) summary
    cl25948
    Location:46 → 1057
    PulA; Pullulanase/glycogen debranching enzyme [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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