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OT_ostta03g05110 Methylmalonic aciduria and homocystinuria type D protein [ Ostreococcus tauri ]

Gene ID: 9832808, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta03g05110
Gene description
Methylmalonic aciduria and homocystinuria type D protein
Locus tag
OT_ostta03g05110
Gene type
protein coding
RNA name
Methylmalonic aciduria and homocystinuria type D protein
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot03g04930
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Genomic context

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See OT_ostta03g05110 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_014428.2 (849462..850188, complement)

Chromosome 3 - NC_014428.2Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting-associated protein 13A N-terminal domain Neighboring gene DnaJ domain Neighboring gene DNA mismatch repair protein MutS-like,N-terminal Neighboring gene unnamed product

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014428.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Methylmalonic aciduria and homocystinuria type D protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014428.2 Reference assembly

    Range
    849462..850188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022984905.1 → XP_022838625.1  Methylmalonic aciduria and homocystinuria type D protein [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090N313
    Conserved Domains (1) summary
    pfam10229
    Location:13 → 148
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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