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OT_ostta08g03260 Tetratricopeptide repeat [ Ostreococcus tauri ]

Gene ID: 9831464, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta08g03260
Gene description
Tetratricopeptide repeat
Locus tag
OT_ostta08g03260
Gene type
protein coding
RNA name
Tetratricopeptide repeat
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot08g03160
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Genomic context

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See OT_ostta08g03260 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Sequence:
Chromosome: 8; NC_014433.2 (551713..554505, complement)

Chromosome 8 - NC_014433.2Genomic Context describing neighboring genes Neighboring gene Translation elongation/initiation factor/Ribosomal, beta-barrel Neighboring gene Squalene/phytoene synthase Neighboring gene Lipase, class 3 Neighboring gene unnamed product

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014433.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Tetratricopeptide repeat

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014433.2 Reference assembly

    Range
    551713..554505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022983632.1 → XP_022841030.1  Tetratricopeptide repeat [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090M8S0, A0A1Y5IBU8
    Conserved Domains (3) summary
    sd00006
    Location:785 → 813
    TPR; TPR repeat [structural motif]
    pfam02151
    Location:203 → 236
    UVR; UvrB/uvrC motif
    pfam13424
    Location:783 → 859
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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