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OT_ostta16g02020 Asparagine-linked glycosylation protein 1-like [ Ostreococcus tauri ]

Gene ID: 9831105, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta16g02020
Gene description
Asparagine-linked glycosylation protein 1-like
Locus tag
OT_ostta16g02020
Gene type
protein coding
RNA name
Asparagine-linked glycosylation protein 1-like
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot16g02160
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Genomic context

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See OT_ostta16g02020 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_014441.2 (348526..349887, complement)

Chromosome 16 - NC_014441.2Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat Neighboring gene Cation-transporting P-type ATPase, C-terminal Neighboring gene unnamed product Neighboring gene Methylenetetrahydrofolate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014441.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Asparagine-linked glycosylation protein 1-like

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014441.2 Reference assembly

    Range
    348526..349887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003083618.2 → XP_003083666.2  Asparagine-linked glycosylation protein 1-like [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A096P833, A0A1Y5IB20
    Conserved Domains (1) summary
    cl10013
    Location:17 → 451
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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