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Mtmr14 myotubularin related protein 14 [ Mus musculus (house mouse) ]

Gene ID: 97287, updated on 14-Nov-2024

Summary

Official Symbol
Mtmr14provided by MGI
Official Full Name
myotubularin related protein 14provided by MGI
Primary source
MGI:MGI:1916075
See related
Ensembl:ENSMUSG00000030269 AllianceGenome:MGI:1916075
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
1110061O04Rik
Summary
Predicted to enable phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity and phosphatidylinositol-3-phosphate phosphatase activity. Predicted to be involved in dephosphorylation. Predicted to be located in perinuclear region of cytoplasm and ruffle. Is expressed in cerebral cortex and retina. Human ortholog(s) of this gene implicated in centronuclear myopathy 1. Orthologous to human MTMR14 (myotubularin related protein 14). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in ovary adult (RPKM 18.6), thymus adult (RPKM 14.9) and 28 other tissues See more
Orthologs
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Genomic context

See Mtmr14 in Genome Data Viewer
Location:
6 E3; 6 52.74 cM
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (113214596..113258353)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (113237635..113281392)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_17032 Neighboring gene STARR-seq mESC enhancer starr_17033 Neighboring gene SET domain containing 5 Neighboring gene lipoma HMGIC fusion partner-like protein 4 Neighboring gene STARR-positive B cell enhancer ABC_E683 Neighboring gene STARR-seq mESC enhancer starr_17036 Neighboring gene STARR-positive B cell enhancer ABC_E237 Neighboring gene copine family member IX Neighboring gene bromodomain and PHD finger containing, 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Gene trapped (1) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14; myotubularin-related protein 14
Names
mJumpy
phosphatidylinositol-3-phosphate phosphatase
NP_001349111.1
NP_001349112.1
NP_001349114.1
NP_081125.2
XP_006506887.1
XP_006506889.1
XP_006506890.1
XP_030111546.1
XP_030111547.1
XP_030111548.1
XP_036008311.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001362182.1NP_001349111.1  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' end compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
    Source sequence(s)
    AC153592, AC155287
    Conserved Domains (2) summary
    cd13213
    Location:127243
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl21483
    Location:280385
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  2. NM_001362183.1NP_001349112.1  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1.
    Source sequence(s)
    AC153592, AC155287
    Conserved Domains (2) summary
    cd13213
    Location:7123
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl21483
    Location:160265
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  3. NM_001362185.1NP_001349114.1  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC153592, AC155287
    Conserved Domains (2) summary
    cl17171
    Location:3859
    PH-like; Pleckstrin homology-like domain
    cl21483
    Location:96201
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  4. NM_026849.2NP_081125.2  phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR14 isoform 1

    See identical proteins and their annotated locations for NP_081125.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    BB256623, CD805346, CX207820, DV648379, DV653288, DV653632
    Consensus CDS
    CCDS20412.2
    UniProtKB/Swiss-Prot
    Q8VEL2
    Related
    ENSMUSP00000108771.3, ENSMUST00000113146.9
    Conserved Domains (2) summary
    cd13213
    Location:127243
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:293386
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

RNA

  1. NR_155432.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC153592, AC155287
  2. NR_155433.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC153592, AC155287, AK161445
  3. NR_155434.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC153592, AC155287, AK034867
    Related
    ENSMUST00000129883.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    113214596..113258353
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506824.4XP_006506887.1  myotubularin-related protein 14 isoform X1

    Conserved Domains (2) summary
    cd13213
    Location:127243
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:293386
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  2. XM_006506826.4XP_006506889.1  myotubularin-related protein 14 isoform X2

    Conserved Domains (2) summary
    cd13213
    Location:127243
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:293386
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  3. XM_006506827.4XP_006506890.1  myotubularin-related protein 14 isoform X4

    Conserved Domains (2) summary
    cl17171
    Location:130
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:80173
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  4. XM_030255686.1XP_030111546.1  myotubularin-related protein 14 isoform X3

    Conserved Domains (2) summary
    cd13213
    Location:7123
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:173266
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  5. XM_036152418.1XP_036008311.1  myotubularin-related protein 14 isoform X5

    Conserved Domains (2) summary
    cd13213
    Location:7123
    PH-GRAM_MTMR14; Myotubularian (MTM) related 14 protein (MTMR14) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:173266
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  6. XM_030255687.1XP_030111547.1  myotubularin-related protein 14 isoform X4

    Conserved Domains (2) summary
    cl17171
    Location:130
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:80173
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
  7. XM_030255688.2XP_030111548.1  myotubularin-related protein 14 isoform X6

    Conserved Domains (1) summary
    cl28904
    Location:49142
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

RNA

  1. XR_001785185.2 RNA Sequence

  2. XR_377503.4 RNA Sequence

  3. XR_003956267.1 RNA Sequence