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MICPUCDRAFT_60988 uncharacterized protein [ Micromonas pusilla CCMP1545 ]

Gene ID: 9686780, updated on 1-Feb-2024

Summary

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Gene symbol
MICPUCDRAFT_60988
Gene description
uncharacterized protein
Locus tag
MICPUCDRAFT_60988
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Micromonas pusilla CCMP1545 (strain: CCMP1545)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Genomic context

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See MICPUCDRAFT_60988 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_003315890.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315890.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_003061341.1
  • hits pfam domains WD (beta-transducin repeats) and NUC153 (small domain found in a novel nucleolar family)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315890.1 Reference assembly

    Range
    1047639..1050027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003061295.1 → XP_003061341.1  uncharacterized protein MICPUCDRAFT_60988 [Micromonas pusilla CCMP1545]

    See identical proteins and their annotated locations for XP_003061341.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C1N066
    Conserved Domains (4) summary
    COG2319
    Location:77 → 324
    WD40; WD40 repeat [General function prediction only]
    pfam08159
    Location:550 → 578
    NUC153; NUC153 domain
    sd00039
    Location:75 → 112
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:166 → 316
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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