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FKS1 glycosyltransferase family 48 [ Fusarium vanettenii 77-13-4 ]

Gene ID: 9679163, updated on 17-May-2024

Summary

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Gene symbol
FKS1
Gene description
glycosyltransferase family 48
Locus tag
NECHADRAFT_59665
See related
FungiDB:NECHADRAFT_59665; VEuPathDB:NECHADRAFT_59665
Gene type
protein coding
RNA name
glycosyltransferase family 48
RefSeq status
PROVISIONAL
Organism
Fusarium vanettenii 77-13-4 (isolate: 77-13-4, culture-collection: FGSC:9596)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium solani species complex; Fusarium vanettenii
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Genomic context

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See FKS1 in Genome Data Viewer
Location:
chromosome: 4, map: unlocalized
Exon count:
3

NW_003315830.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315830.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. Coleman JJ, et al. PLoS Genet, 2009 Aug. PMID 19714214, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall polysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase family 48
XP_003040747.1
  • 1,3-b-D-glucan synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315830.1 Reference assembly

    Range
    102806..109129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003040701.1 → XP_003040747.1  glycosyltransferase family 48 [Fusarium vanettenii 77-13-4]

    See identical proteins and their annotated locations for XP_003040747.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C7ZLR4, Q2L7J5
    Conserved Domains (2) summary
    pfam02364
    Location:854 → 1682
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:346 → 453
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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