U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9629518 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 [ Selaginella moellendorffii ]

Gene ID: 9629518, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9629518
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
Locus tag
SELMODRAFT_184345
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
Also known as
TPS4
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314354.1 (535183..538419, complement)

NW_003314354.1Genomic Context describing neighboring genes Neighboring gene dynein heavy chain 1, axonemal Neighboring gene spermatogenesis-associated protein 20 Neighboring gene protein GRAVITROPIC IN THE LIGHT 1 Neighboring gene protein JASON Neighboring gene uncharacterized LOC9629520 Neighboring gene copper-transporting ATPase PAA1, chloroplastic Neighboring gene uncharacterized LOC112341898

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003314354 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5
Names
trehalose phosphate synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314354.1 Reference v1.0

    Range
    535183..538419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002989068.2 → XP_002989114.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5

    See identical proteins and their annotated locations for XP_002989114.1

    UniProtKB/TrEMBL
    D8T0H9
    Conserved Domains (3) summary
    cd03788
    Location:59 → 558
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 857
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:608 → 838
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials