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SCHCODRAFT_02607487 UFD1-domain-containing protein [ Schizophyllum commune H4-8 ]

Gene ID: 9595506, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_02607487
Gene description
UFD1-domain-containing protein
Locus tag
SCHCODRAFT_02607487
See related
FungiDB:SCHCODRAFT_02607487; VEuPathDB:SCHCODRAFT_02607487
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_74188
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Genomic context

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See SCHCODRAFT_02607487 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_026089538.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene T-complex protein 1 Neighboring gene Piwi-domain-containing protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089538.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UFD1-domain-containing protein
XP_003035797.2
  • UFD1-domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089538.1 Reference assembly

    Range
    2996614..2998603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003035751.2 → XP_003035797.2  UFD1-domain-containing protein [Schizophyllum commune H4-8]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials