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VDBG_10194 histone-lysine N-methyltransferase [ Verticillium alfalfae VaMs.102 ]

Gene ID: 9536625, updated on 25-Jan-2024

Summary

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Gene symbol
VDBG_10194
Gene description
histone-lysine N-methyltransferase
Locus tag
VDBG_10194
Gene type
protein coding
RNA name
histone-lysine N-methyltransferase
RefSeq status
PROVISIONAL
Organism
Verticillium alfalfae VaMs.102 (strain: VaMs.102)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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Genomic context

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See VDBG_10194 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_003315045.1Genomic Context describing neighboring genes Neighboring gene AcdS Neighboring gene taurine catabolism dioxygenase TauD Neighboring gene autophagy protein Neighboring gene vacuolar protein sorting-associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315045.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K79 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription regulatory region DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in subtelomeric heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
histone-lysine N-methyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315045.1 Reference assembly

    Range
    7816..9348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003009776.1 → XP_003009822.1  histone-lysine N-methyltransferase [Verticillium alfalfae VaMs.102]

    See identical proteins and their annotated locations for XP_003009822.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C9SZ69
    Conserved Domains (1) summary
    cl17173
    Location:285 → 487
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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Gene LinkOut

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