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VDBG_00571 carrier protein YMC2 [ Verticillium alfalfae VaMs.102 ]

Gene ID: 9534025, updated on 21-Dec-2023

Summary

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Gene symbol
VDBG_00571
Gene description
carrier protein YMC2
Locus tag
VDBG_00571
Gene type
protein coding
RNA name
carrier protein YMC2
RefSeq status
PROVISIONAL
Organism
Verticillium alfalfae VaMs.102 (strain: VaMs.102)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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Genomic context

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See VDBG_00571 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_003315038.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 60S ribosomal protein L22 Neighboring gene U3 small nucleolar ribonucleoprotein IMP3 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
carrier protein YMC2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315038.1 Reference assembly

    Range
    1903203..1904198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003008843.1 → XP_003008889.1  carrier protein YMC2 [Verticillium alfalfae VaMs.102]

    See identical proteins and their annotated locations for XP_003008889.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C9S6F1
    Conserved Domains (1) summary
    pfam00153
    Location:120 → 215
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials