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ybgC esterase/thioesterase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948907, updated on 19-Sep-2024

Summary

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Official Symbol
ybgC
Official Full Name
esterase/thioesterase
Primary source
ECOCYC:EG11110
Locus tag
b0736
See related
ASAP:ABE-0002508
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0725
Summary
YbgC-ACP interacts with PssA and PlsB. ybgC is the first gene in tolQRA operon. [More information is available at EcoGene: EG11110]. Esterase/thioesterase activity of YbgC was discovered in a high-throughput screen of purified proteins . [More information is available at EcoCyc: EG11110].
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Genomic context

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Sequence:
NC_000913.3 (774752..775156)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene cytochrome bd-I accessory subunit CydX Neighboring gene PF09600 family protein YbgE Neighboring gene Tol-Pal system protein TolQ Neighboring gene Tol-Pal system protein TolR Neighboring gene Tol-Pal system protein TolA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of proteins with the 'hot dog' fold: prediction of function and identification of catalytic residues of hypothetical proteins. Pidugu LS, et al. BMC Struct Biol, 2009 May 28. PMID 19473548, Free PMC Article
  2. Characterization of the tol-pal region of Escherichia coli K-12: translational control of tolR expression by TolQ and identification of a new open reading frame downstream of pal encoding a periplasmic protein. Vianney A, et al. J Bacteriol, 1996 Jul. PMID 8763928, Free PMC Article
  3. Organisation and evolution of the tol-pal gene cluster. Sturgis JN. J Mol Microbiol Biotechnol, 2001 Jan. PMID 11200223
  4. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
  5. A protein network for phospholipid synthesis uncovered by a variant of the tandem affinity purification method in Escherichia coli. Gully D, et al. Proteomics, 2006 Jan. PMID 16294310

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables fatty acyl-CoA hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables thiolester hydrolase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
esterase/thioesterase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    774752..775156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415264.1 esterase/thioesterase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415264.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376MAY1
    Conserved Domains (1) summary
    PRK10800
    Location:4 → 133
    PRK10800; acyl-CoA thioesterase YbgC; Provisional
Nucleotide Protein
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