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yggF fructose 1,6-bisphosphatase YggF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947410, updated on 19-Sep-2024

Summary

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Official Symbol
yggF
Official Full Name
fructose 1,6-bisphosphatase YggF
Primary source
ECOCYC:EG11245
Locus tag
b2930
See related
ASAP:ABE-0009615
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2926; yggK
Summary
YggF and GlpX are paralogs. [More information is available at EcoGene: EG11245].
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Genomic context

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Sequence:
NC_000913.3 (3075217..3076182, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene D-erythrose-4-phosphate dehydrogenase Neighboring gene P-loop NTPase domain-containing protein YggC Neighboring gene fumarase E Neighboring gene putative zinc-binding dehydrogenase YggP Neighboring gene mannitol-specific PTS enzyme IICB component CmtA Neighboring gene mannitol-specific PTS enzyme IIA component CmtB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and biochemical characterization of the type II fructose-1,6-bisphosphatase GlpX from Escherichia coli. Brown G, et al. J Biol Chem, 2009 Feb 6. PMID 19073594, Free PMC Article
  2. Identification, molecular cloning and sequence analysis of a gene cluster encoding the class II fructose 1,6-bisphosphate aldolase, 3-phosphoglycerate kinase and a putative second glyceraldehyde 3-phosphate dehydrogenase of Escherichia coli. Alefounder PR, et al. Mol Microbiol, 1989 Jun. PMID 2546007
  3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables fructose 1,6-bisphosphate 1-phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables fructose 1,6-bisphosphate 1-phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables fructose 1,6-bisphosphate 1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables manganese ion binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gluconeogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in glycerol metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
fructose 1,6-bisphosphatase YggF
NP_417405.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3075217..3076182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417405.1 fructose 1,6-bisphosphatase YggF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417405.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1PNI7, A0A8S7T1M3
    Conserved Domains (1) summary
    PRK12388
    Location:1 → 321
    PRK12388; class II fructose-bisphosphatase
Nucleotide Protein
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