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PITG_02307 alpha,alpha-trehalose-phosphate synthase [UDP-forming], putative [ Phytophthora infestans T30-4 ]

Gene ID: 9469689, updated on 17-May-2024

Summary

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Gene symbol
PITG_02307
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming], putative
Locus tag
PITG_02307
See related
FungiDB:PITG_02307; VEuPathDB:PITG_02307
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Phytophthora infestans T30-4 (strain: T30-4)
Lineage
Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
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Genomic context

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See PITG_02307 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_003303756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003303756.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming], putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003303756.1 Reference assembly

    Range
    1386663..1390304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002907205.1 → XP_002907251.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming], putative [Phytophthora infestans T30-4]

    See identical proteins and their annotated locations for XP_002907251.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A833TFY5, D0MW02
    Conserved Domains (3) summary
    cd03788
    Location:99 → 540
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PRK14501
    Location:99 → 781
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
    cl21460
    Location:573 → 802
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

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