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PITG_14140 glycoside hydrolase, putative [ Phytophthora infestans T30-4 ]

Gene ID: 9468585, updated on 17-May-2024

Summary

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Gene symbol
PITG_14140
Gene description
glycoside hydrolase, putative
Locus tag
PITG_14140
See related
FungiDB:PITG_14140; VEuPathDB:PITG_14140
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Phytophthora infestans T30-4 (strain: T30-4)
Lineage
Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
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Genomic context

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See PITG_14140 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_003303727.1Genomic Context describing neighboring genes Neighboring gene glycoside hydrolase, putative Neighboring gene 1,3-beta-glucanosyltransferase, putative Neighboring gene 1,3-beta-glucanosyltransferase, putative Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003303727.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-glucanosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoside hydrolase, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003303727.1 Reference assembly

    Range
    834981..836502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002899213.1 → XP_002899259.1  glycoside hydrolase, putative [Phytophthora infestans T30-4]

    See identical proteins and their annotated locations for XP_002899259.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A833SIV2, D0NNQ7
    Conserved Domains (1) summary
    cl23725
    Location:19 → 367
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

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