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yegW putative DNA-binding transcriptional regulator YegW [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946639, updated on 10-Oct-2024

Summary

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Official Symbol
yegW
Official Full Name
putative DNA-binding transcriptional regulator YegW
Primary source
ECOCYC:G7133
Locus tag
b2101
See related
ASAP:ABE-0006952
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2094
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Genomic context

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Sequence:
NC_000913.3 (2182035..2182781, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene fructose-bisphosphate aldolase class I Neighboring gene putative transporter YegT Neighboring gene putative ADP-ribosylglycohydrolase YegU Neighboring gene putative sugar kinase YegV Neighboring gene putative glycosyl hydrolase YegX Neighboring gene bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase Neighboring gene hydroxyethylthiazole kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Zaslaver A, et al. Nat Methods, 2006 Aug. PMID 16862137
  2. From the genome sequence to the proteome and back: evaluation of E. coli genome annotation with a 2-D gel-based proteomics approach. Maillet I, et al. Proteomics, 2007 Apr. PMID 17366475
  3. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
  4. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
  5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative DNA-binding transcriptional regulator YegW

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2182035..2182781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416604.1 putative DNA-binding transcriptional regulator YegW [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416604.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAP9U2H8
    Conserved Domains (1) summary
    COG2188
    Location:19 → 247
    MngR; DNA-binding transcriptional regulator, GntR family [Transcription]
Nucleotide Protein
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