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yfdE acetyl-CoA:oxalate CoA-transferase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946432, updated on 19-Sep-2024

Summary

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Official Symbol
yfdE
Official Full Name
acetyl-CoA:oxalate CoA-transferase
Primary source
ECOCYC:G7234
Locus tag
b2371
See related
ASAP:ABE-0007821
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2367
Summary
EvgAS regulon. the frc-oxc-yfdVE operon is adjacent and convergent on evgAS. [More information is available at EcoGene: EG13284].
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Genomic context

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Sequence:
NC_000913.3 (2488023..2489168, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein EvgL Neighboring gene DNA-binding transcriptional activator EvgA Neighboring gene sensor histidine kinase EvgS Neighboring gene putative transport protein YfdV Neighboring gene oxalyl-CoA decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Function and X-ray crystal structure of Escherichia coli YfdE. Mullins EA, et al. PLoS One, 2013. PMID 23935849, Free PMC Article
  2. Newly identified genes involved in the signal transduction of Escherichia coli K-12. Utsumi R, et al. Gene, 1994 Mar 11. PMID 8125343
  3. Escherichia coli gene expression responsive to levels of the response regulator EvgA. Masuda N, et al. J Bacteriol, 2002 Nov. PMID 12399493, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables CoA-transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables acetyl-CoA:oxalate CoA-transferase IDA
Inferred from Direct Assay
more info
 PubMed 
enables acetyl-CoA:oxalate CoA-transferase IEA
Inferred from Electronic Annotation
more info
  
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
acetyl-CoA:oxalate CoA-transferase
NP_416872.4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2488023..2489168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416872.4 acetyl-CoA:oxalate CoA-transferase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416872.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7A6ZV08
    Conserved Domains (1) summary
    PRK11430
    Location:1 → 381
    PRK11430; putative CoA-transferase; Provisional
Nucleotide Protein
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