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letA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946353, updated on 11-Sep-2024

Summary

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Official Symbol
letA
Primary source
ECOCYC:G7006
Locus tag
b1833
See related
ASAP:ABE-0006098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1832; yebS
Summary
Membrane topology predictions using experimentally determined C terminus locations indicate that YebS has 8 transmembrane helices and the C-terminus is located in the cytoplasm . [More information is available at EcoCyc: G7006].
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Genomic context

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Sequence:
NC_000913.3 (1916258..1917541)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene RNA chaperone ProQ Neighboring gene free methionine-(R)-sulfoxide reductase Neighboring gene lipophilic envelope spanning tunnel Neighboring gene 16S rRNA m(5)C1407 methyltransferase Neighboring gene DUF1480 domain-containing protein YebV

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Experimentally based topology models for E. coli inner membrane proteins. Rapp M, et al. Protein Sci, 2004 Apr. PMID 15044727, Free PMC Article
  2. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
  3. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
  5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
intermembrane transport protein LetA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1916258..1917541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416347.1 intermembrane transport protein LetA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416347.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EKS6
    Conserved Domains (1) summary
    TIGR00155
    Location:16 → 417
    pqiA_fam; integral membrane protein, PqiA family
Nucleotide Protein
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