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CDRT8 CMT1A duplicated region transcript 8 [ Homo sapiens (human) ]

Gene ID: 94151, updated on 10-Oct-2023

Summary

Official Symbol
CDRT8provided by HGNC
Official Full Name
CMT1A duplicated region transcript 8provided by HGNC
Primary source
HGNC:HGNC:14387
See related
AllianceGenome:HGNC:14387
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.1) See more
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Genomic context

See CDRT8 in Genome Data Viewer
Location:
17p12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (15104985..15106187, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (15010992..15012194, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (15008302..15009504, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene CMT1A duplicated region transcript 7 Neighboring gene uncharacterized LOC101928475 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr17:15009287-15010486 Neighboring gene uncharacterized LOC107984976 Neighboring gene uncharacterized LOC105371547 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:15083139-15084083

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103559.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA432141, CR737651

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    15104985..15106187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    15010992..15012194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)