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ricF subunit of a sporulation, competence and biofilm formation regulatory complex controlling RNase Y (RicAFT complex / FAD / two [4Fe-4S]2+) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939945, updated on 12-Feb-2021

Summary

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Gene symbol
ricF
Gene description
subunit of a sporulation, competence and biofilm formation regulatory complex controlling RNase Y (RicAFT complex / FAD / two [4Fe-4S]2+)
Locus tag
BSU_14990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU14990
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Genomic context

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Sequence:
NC_000964.3 (1568420..1568869)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene sporulation-related protein (coat) Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
subunit of a sporulation, competence and biofilm formation regulatory complex controlling RNase Y (RicAFT complex / FAD / two [4Fe-4S]2+)
NP_389382.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10712692, 15175311, 15661000, 23490197, 26434553, 27501195, 28295778; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389382.1 subunit of a sporulation, competence and biofilm formation regulatory complex controlling RNase Y (RicAFT complex / FAD / two [4Fe-4S]2+) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389382.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O34412
    Conserved Domains (1) summary
    COG3679
    Location:6 → 125
    YlbF; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development) [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34412.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases