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epsB protein tyrosine kinase involved in biofilm matrix formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938640, updated on 6-Oct-2023

Summary

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Gene symbol
epsB
Gene description
protein tyrosine kinase involved in biofilm matrix formation
Locus tag
BSU_34360
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34360
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Genomic context

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Sequence:
NC_000964.3 (3528462..3529145, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene bifunctional flagellar clutch and glycosyltransferase acting during biofilm formation Neighboring gene putative extracellular matrix glycosyltransferase Neighboring gene putative UDP-sugar epimerase involved in biofilm matrix formation Neighboring gene modulator of protein tyrosine kinase EpsB involved in biofilm matrix formation Neighboring gene transcriptional regulator of autolysin genes (biofilm formation)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis. Gerwig J, et al. Microbiology (Reading), 2014 Apr. PMID 24493247, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The absence of both protein tyrosine kinases, EpsB and PtkA, resulted in a complete loss of biofilm formation.
    Title: The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
protein tyrosine kinase involved in biofilm matrix formation
NP_391316.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15661000, 15741737, 24493247, 26283769, 28950882; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3528462..3529145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391316.1 protein tyrosine kinase involved in biofilm matrix formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391316.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1J0C4
    Conserved Domains (1) summary
    cd05387
    Location:26 → 216
    BY-kinase; bacterial tyrosine-kinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71051.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases