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deoC deoxyribose-phosphate aldolase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938608, updated on 6-Oct-2023

Summary

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Gene symbol
deoC
Gene description
deoxyribose-phosphate aldolase
Locus tag
BSU_39420
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU39420
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Genomic context

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Sequence:
NC_000964.3 (4051602..4052273, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene pyrimidine-nucleoside phosphorylase Neighboring gene pyrimidine-nucleoside Na+(H+) cotransporter Neighboring gene transcriptional regulator of pyrmidine deoxyribonucleosides degradation (DeoR-dR5P) Neighboring gene putative integral membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
deoxyribose-phosphate aldolase
NP_391821.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 8550462, 10074062, 11065368, 27033207; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    4051602..4052273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391821.2 deoxyribose-phosphate aldolase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391821.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JC40
    Conserved Domains (1) summary
    PRK00507
    Location:1 → 218
    PRK00507; deoxyribose-phosphate aldolase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39121.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases