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yvbX putative epimerase modification of peptidoglycan [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937709, updated on 12-Feb-2021

Summary

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Gene symbol
yvbX
Gene description
putative epimerase modification of peptidoglycan
Locus tag
BSU_34020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34020
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Genomic context

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Sequence:
NC_000964.3 (3491655..3492689, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative leucine permease Neighboring gene miscRNA Neighboring gene component of an iron-sulfur oxidase for L-lactate utilization Neighboring gene component of an iron-sulfur oxidase linked to L-lactate utilization

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative epimerase modification of peptidoglycan
NP_391282.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 12177332; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3491655..3492689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391282.1 putative epimerase modification of peptidoglycan [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391282.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG3858
    Location:1 → 340
    YaaH; Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O32258.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases