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abnA arabinan-endo-1,5-alpha-L-arabinase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937430, updated on 10-Oct-2024

Summary

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Gene symbol
abnA
Gene description
arabinan-endo-1,5-alpha-L-arabinase
Locus tag
BSU_28810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU28810
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Genomic context

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Sequence:
NC_000964.3 (2949053..2950024, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-ribulokinase Neighboring gene L-arabinose isomerase Neighboring gene putative fructose-lysine aminopeptidase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
arabinan-endo-1,5-alpha-L-arabinase
NP_390759.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 14973026, 15556708, 17827291, 25355936; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2949053..2950024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390759.2 arabinan-endo-1,5-alpha-L-arabinase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390759.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAP2LZN1
    Conserved Domains (1) summary
    cd18829
    Location:43 → 317
    GH43_BsArb43A-like; Glycosyl hydrolase family 43 protein such as Bacillus subtilis subsp. subtilis str. 168 endo-alpha-1,5-L-arabinanase Arb43A
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94522.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases