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yxkH putative exported polysaccharide deacetylase, lipoprotein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937411, updated on 6-Jun-2024

Summary

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Gene symbol
yxkH
Gene description
putative exported polysaccharide deacetylase, lipoprotein
Locus tag
BSU_38800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38800
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Genomic context

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Sequence:
NC_000964.3 (3983187..3984026, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative membrane protease Neighboring gene putative bacteriocin Neighboring gene multiple sugar (maltodextrins) transporter ATP-binding protein Neighboring gene transcriptional regulator (regulates yxkF-msmX expression)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative exported polysaccharide deacetylase, lipoprotein
NP_391759.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 22277649; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3983187..3984026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391759.1 putative exported polysaccharide deacetylase, lipoprotein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391759.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G378
    Conserved Domains (1) summary
    cd10918
    Location:121 → 265
    CE4_NodB_like_5s_6s; Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94361.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials