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opuCC glycine betaine/carnitine/choline/choline sulfate ABC transporter (osmoprotectant-binding lipoprotein) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936248, updated on 6-Oct-2023

Summary

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Gene symbol
opuCC
Gene description
glycine betaine/carnitine/choline/choline sulfate ABC transporter (osmoprotectant-binding lipoprotein)
Locus tag
BSU_33810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33810
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Genomic context

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Sequence:
NC_000964.3 (3468253..3469164, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene integral membrane immunity regulator of autophagy Neighboring gene transcriptional regulator of SdpC synthesis operon (ArsR family) Neighboring gene glycine betaine/carnitine/choline/choline sulfate ABC transporter (promiscuous permease) Neighboring gene glycine betaine/carnitine/choline/choline sulfate ABC transporter (promiscuous permease) Neighboring gene glycine betaine/carnitine/choline/choline sulfate ABC transporter (ATP-binding protein)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycine betaine/carnitine/choline/choline sulfate ABC transporter (osmoprotectant-binding lipoprotein)
NP_391261.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 9925583, 10216873, 28256787; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3468253..3469164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391261.1 glycine betaine/carnitine/choline/choline sulfate ABC transporter (osmoprotectant-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391261.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A085C475
    Conserved Domains (1) summary
    cd13608
    Location:33 → 297
    PBP2_OpuCC_like; Substrate-binding protein OpuCC of ABC-type osmoregulatory transporter and related proteins; the type 2 periplasmic-binding protein fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O32243.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases