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gtrA GtrA-like O-antigen conversion [ Enterobacteria phage SfV ]

Gene ID: 935242, updated on 31-May-2023

Summary

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Gene symbol
gtrA
Gene description
GtrA-like O-antigen conversion
Locus tag
SfVp25
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Enterobacteria phage SfV (nat-host: Shigella flexneri)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Myoviridae
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Genomic context

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Sequence:
NC_003444.1 (20028..20390, complement)

NC_003444.1Genomic Context describing neighboring genes Neighboring gene short tail fiber protein Neighboring gene tail fibre assembly protein Neighboring gene glucosyltransferase Neighboring gene GtrB glycosyltransferase for O-antigen conversion Neighboring gene integrase Neighboring gene excisionase Neighboring gene hypothetical protein Neighboring gene protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003444.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of the genes involved in O-antigen modification, attachment, integration and excision in Shigella flexneri bacteriophage SfV. Huan PT, et al. Gene, 1997 Aug 22. PMID 9305767
  2. Complete genomic sequence of SfV, a serotype-converting temperate bacteriophage of Shigella flexneri. Allison GE, et al. J Bacteriol, 2002 Apr. PMID 11889106, Free PMC Article
  3. Shigella flexneri type-specific antigen V: cloning, sequencing and characterization of the glucosyl transferase gene of temperate bacteriophage SfV. Huan PT, et al. Gene, 1997 Aug 22. PMID 9305766

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
GtrA-like O-antigen conversion

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003444.1 Reference assembly

    Range
    20028..20390 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_599057.1 GtrA-like O-antigen conversion [Enterobacteria phage SfV]

    See identical proteins and their annotated locations for NP_599057.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22008
    Conserved Domains (1) summary
    COG2246
    Location:1 → 120
    GtrA; Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose) [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O22008.1

Gene LinkOut

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Molecular Biology Databases