U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9299916 cytochrome P450 708A2 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9299916, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9299916
Gene description
cytochrome P450 708A2
Locus tag
ARALYDRAFT_684148
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC9299916 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (10405517..10419724, complement)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110225748 Neighboring gene cytochrome P450 705A5 Neighboring gene thalianol synthase Neighboring gene uncharacterized LOC110224973

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytochrome P450 708A2
Names
predicted protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    10405517..10419724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002865539.2 → XP_002865585.1  cytochrome P450 708A2 isoform X1

    See identical proteins and their annotated locations for XP_002865585.1

    UniProtKB/TrEMBL
    D7MKC1
    Conserved Domains (1) summary
    cl12078
    Location:23 → 475
    p450; Cytochrome P450

  2. XM_021023334.1 → XP_020878993.1  cytochrome P450 708A2 isoform X2

    UniProtKB/TrEMBL
    D7MKC1
    Conserved Domains (1) summary
    cl12078
    Location:23 → 475
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials