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LOC9267195 xyloglucan galactosyltransferase KATAMARI1 homolog [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9267195, updated on 12-Jul-2024

Summary

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Gene symbol
LOC9267195
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
OSNPB_100459300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC9267195 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (17527876..17529849, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (16861656..16863511, complement)

Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene siderophore biosynthesis regulatory protein URBS1 Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog Neighboring gene uncharacterized LOC136353589 Neighboring gene xyloglucan galactosyltransferase KATAMARI1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog
Names
Os10g0459300

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

    Range
    17527876..17529849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015757727.3 → XP_015613213.1  xyloglucan galactosyltransferase KATAMARI1 homolog

    UniProtKB/TrEMBL
    A0A0P0XUY1, A2Z865, A3C5G4, C7J7K4, Q7G2T0, Q94LT5
    Conserved Domains (1) summary
    pfam03016
    Location:96 → 438
    Exostosin; Exostosin family
Nucleotide Protein
Heading Accession and Version

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